PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc002284.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 200aa    MW: 22281.1 Da    PI: 6.1385
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc002284.1_g00003.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2316.2e-108352855
                      AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
                             ++r++lg+f+tae+Aa+a+++a+  + g
  Itr_sc002284.1_g00003.1  8 KRRVWLGTFDTAEQAARAYDEAAILMSG 35
                             59********************987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.999143IPR001471AP2/ERF domain
CDDcd000181.28E-19145No hitNo description
SMARTSM003802.3E-12549IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-12544IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-18543IPR001471AP2/ERF domain
PfamPF008472.4E-6733IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MILDDYRKRR VWLGTFDTAE QAARAYDEAA ILMSGRNAKT NFPITHDSEG EPKTTEPNNQ  60
KHATIPSSSS KALSEILHAK LRRCSKVPTP SLTCLRLDTE NSHIGVWQKR AGQSSDSKWV  120
MTIELQKKKN GGGNGERVEE GMMDCSKKAP EIMVDGGRGV RSGLDEEERL ALQMIEELLQ  180
INTPNCPSFD AQVEENSFCI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009594389.16e-78PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI331e-52WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLI1LZX94e-69I1LZX9_SOYBN; Uncharacterized protein
STRINGGLYMA13G23570.11e-68(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13522476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-44ERF family protein